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Published byGwenda Charles Modified over 9 years ago
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LXS RI PANEL: LARGEST EXTANT RI SERIES 78 STRAINS BETH BENNETT T.E. JOHNSON UNIV OF COLORADO BOULDER, CO
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DERIVATION OF ILS & ISS 8 WAY CROSS: A, AKR, BALB, C3H, C57, DBA, ISBI, RIII HETEROGENOUS STOCK (HS) LS & SS ILS & ISS Select for differential ethanol sensitivity for 25 generations Inbreed 20 generations
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RI CONSTRUCTION
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BODY WT IN FEMALES -Female weight chosen as mapping character -Not selected in progenitor strains -Possible interaction with fertility, lifespan -Easily measured test phenotype for LXS RI -Measured at 30 day intervals in generation 13 -94% inbred, 89% loci fixed -Heritability estimated -QTLs mapped using MapManagerQT
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Genotyping R.Williams and L. Lu -Begun at N 18 -All Parents within Strain Genotyped -Expect 96% of Loci Fixed -361 Polymorphic Markers Identified -Approximate Marker Density of 4.5 cM
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30 DAY WEIGHTS
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WT DISTRIBUTION AT 60, 90, 120, 150 DAYS
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Heritability (h 2 ), Genetic correlation (r G ), and Phenotypic correlation ( r P ) 30 Day 60 Day90 Day120 Day150 Day 30 Day. 49.64.53.57.56 60 Day.57. 62.79.83.80 90 Day.49.88.66.86.91 120 Day.53.83.90. 64.95 150 Day.53.84.89.92.72
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FEMALE BODY WEIGHT IN LXS RIs AT 30 DAY INTERVALS WT IN GRAMS
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GROWTH RATE AT 30 DAY INTERVALS
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h 2 for Growth Rate Interval (Days) Mean Growth Rate + SE N strains h 2 (95% CI) 30-601.20 + 0.00497.48 (.39-.56) 60-900.49 + 0.00386.42 (.32-.50) 90-1200.37 + 0.00375.25 (.15-.35) 120-1500.25 + 0.00263.22 (.09-.33)
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QTL MAPPING FOR BODY WT AT 30 DAYS
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QTL MAPPING FOR BODY WT AT 60 DAYS LOD=3.4
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QTL MAPPING FOR BODY WT AT 90, 120 & 150 DAYS LOD=3.2
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PHENOTYPES BEING ASSESSED IN LXS RI -ETHANOL STUDY: -Ethanol sensitivity & blood ethanol at awakening -Ethanol tolerance -Low dose ethanol activation AGING STUDY: -Lifespan -Dietary restriction responses -Torpor, Food processing efficiency, Hair growth rate
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