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Network of Excellence Benchmark Carlos Oscar Sorzano Techn. Director I 2 PC Natl. Center Biotechnology (CSIC)

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Presentation on theme: "Network of Excellence Benchmark Carlos Oscar Sorzano Techn. Director I 2 PC Natl. Center Biotechnology (CSIC)"— Presentation transcript:

1 Network of Excellence Benchmark Carlos Oscar Sorzano Techn. Director I 2 PC Natl. Center Biotechnology (CSIC)

2 NoE Benchmark

3 There was a defined task. The community accepted the challenge. The result of the challenge could have served as a starting point to improve 3D angular orientation.

4 NoE Benchmark The challenge did not arise from the community: although the community accepted it.

5 NoE Benchmark Evaluation was a black box: the evaluation Figure of Merit was unknown a priori.

6 NoE Benchmark There was not a clear interchange standard: there was no way of testing that the submitted results where actually in the correct format, coordinate system, Euler signs, …

7 NoE Benchmark There was a single dataset: there was no exploration of different packages performing better under different circumstances.

8 NoE Benchmark Egos were too high

9 NoE Benchmark It was a single shot. 1891:10.8s 1906:10.6s 1911:10.5s 1924:10.4s 1930:10.3s 1936:10.2s … 2009:9.58s

10 For future benchmarks Well defined task. Well defined interchange format. Task proposed by the community. Different datasets. Transparent evaluation with pre-test datasets. Acceptance of competition as a healthy way to improve. Possibility to withdraw from competition. Competitions should be repeated over time.


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