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Large scale models of the brain Institut des Sciences du Mouvement Viktor Jirsa Theoretical Neuroscience Group Anandamohan Ghosh Rolf Kötter Randy McIntosh Young-Ah Rho Michael Breakspear Stuart Knock Gustavo Deco
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Honey et al PNAS 2007, Ghosh et al Plos CB 2008, Deco et al PNAS 2009 Izhikevich & Edelman 2008 Henry Markram – Blue Brain Ananthanarayanan et al. IBM 2009 Information processing carried out by large scale neural networks
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Motivation Mean field models collapse the dynamic characteristics of a voxel into a single neurocomputational unit of neurons with similar statistics Deco et al. PLoS CB2009
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Globally coupled network of Fitzhugh-Nagumo neurons
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Network Dynamics
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Define a continuous field parametrized by the dispersed parameter Rewrite the network equations in terms of q(z,t) Coupled mean fields Assisi, Jirsa, Kelso PRL2005 Stefanescu, Jirsa Plos CB 2009
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Express the dynamics of the network in z-space in terms of z- spatial modes and the corresponding time dependent amplitudes. Assisi, Jirsa, Kelso PRL2005 Stefanescu, Jirsa Plos CB 2009
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The mode equations are given by, Mode Equations Assisi, Jirsa, Kelso PRL2005 Stefanescu, Jirsa Plos CB 2009
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Mode Dynamics
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Contour lines of equal mean field amplitude in space Network dynamicsMode dynamics Assisi, Jirsa, Kelso PRL2005 Stefanescu, Jirsa Plos CB 2009
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Jirsa & Stefanescu Bul. Math. Biol (in press) Neural field models Full network Reduced neural field
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Origin of ultraslow fluctuations: neural activity? Simultaneous EEG and fMRI study finds cross- correlations between BOLD signal and the power fluctuations in each frequency band. Mantini et al. PNAS 2007
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Generation of the rest state activity? Function? Product of chaotic processes involving the thalamocortical loop (Lopes da Silva et al. 1997; Niedermeyer 1997) Distinct alpha generators (Nunez et al 2001) Large scale connectivity matrix and chaotic neural activity (Honey et al PNAS 2007) Noise driven exploration of the high-dimensional phase space defined by the network with time delays (Ghosh et al Plos CB2008) Stochastic Resonance in the network with time delays (Deco et al PNAS 2009) « Rest state fluctuations reflect unconstrained but consciously directed mental activity » Rest state network fluctuations observed in anaesthesized monkeys (Vincent et al., Nature 2007)
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Regional map of the primate brain (Kötter & Wanke, 2005) MonkeyHuman
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Ghosh et al. PLoS CB 2008
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Ghosh et al Plos CB 2008; Deco et al PNAS 2009 Implementation of large scale model Assisi, Jirsa Kelso PRL 2005 Stefanescu, Jirsa PLoS CB 2009 Jirsa, Stefanescu Bull.Math.Biol (in press)
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Linear stability analysis linearization Let the solution be characteristic equation in l For N coupled FHN oscillators the characteristic equation is factorizable: Characteristic equation:
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Ghosh et al. PLoS CB 2008
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Hemodynamic model: combining Balloon/Windkessel Model with a model of how synaptic activity causes changes in regional flow Nonlinear coupling term: Balloon/Windkessel model Linear coupling term: How evoked changes in blood flow are transformed into a blood oxygenation level dependent(BOLD)
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Case 1
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Case 3
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Compare to Fox et al. PNAS 2005
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Resting state network in BOLD signals Fox et al. PNAS (2005) Task-negative regions: MPF(medial prefrontal cortex), PCC(posterior cingulate precuneus), LP(Lateral parietal cortex) Task-positive regions: IPS(intraparietal sulcus cortex), FEF(the frontal eye field), MT(middle temporal region)
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CCPFEFPCIPCIPPFCMVACD CCP++-+-+ FEF++---+ PCI--+++- PCIP+-++-- PFCM--+-+- VACD++---+ Cross correlations between six areas: Ghosh et al PLOS CB 2008 Compare to Fox et al. PNAS 2005
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15uV -15uV 0 uV 400fT -400fT 0fT Forward EEG/MEG solution in realistic head models
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Qf = 1, Qs = 1 Honey et al PNAS 2007; Ghosh et al Plos CB 2008; Jirsa Phil. Trans. Royal Soc. A 2009
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What is the dynamic mechanism leading to the emergence of these coherent fluctuations? Synchronization?
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F FitzHugh-Nagumo Neuron Rho, Jirsa & McIntosh (in preparation)
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BOLD in CCA is correlated with coherence between PCI and CCP, and BOLD time series are shifted with time lag(2.4sec). Rho, Jirsa & McIntosh (in preparation)
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Other working points, maybe self-sustained oscillations?
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Deco, Jirsa, McIntosh et al. PNAS (2009) Different working point: What is the role of synchronization? Two clusters of synchronization
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Synchronization of clusters Red – cluster 1 Black – cluster 2 Blue – difference Power spectrum of ultraslow oscillations with and without time delay Stochastic Resonance Cross correlation as a function of noise level Maximal Power as a function of noise level Deco, Jirsa, McIntosh et al. PNAS (2009)
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Summary of results Rest state activity is interpreted as the « noise-driven exploration of the equilibrium state of the brain network » The space-time structure is crucial for the emergence of the rest state networks. Intermittent synchronization of subnetworks gives rise to ultra-slow oscillations in BOLD signal. Codebox Research ATIP (CNRS) James S. McDonnell Foundation Thank you
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