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Enhancing Quality Of Dystocia Data By Integration Into A National Dairy Cattle Production Database C. P. Van Tassell 1,2 and G. R. Wiggans 1 Animal Improvement Programs Laboratory 1 and Gene Evaluation and Mapping Laboratory 2 Agricultural Research Service, United States Department of Agriculture Beltsville, MD 20705-2350, USA World Congress on Genetics Applied to Livestock Production Le Corum, Montpellier – France – August 19-23 2002 7 th August 20, Session 20: “Prediction of Breeding Values” No. 20-17 INTRODUCTION 1999 - AIPL first calculated national genetic evaluations for calving ease (CE) (dystocia). The addition of maternal effects improves evaluations by addressing antagonism between direct and maternal genetic effects on dystocia. Only 58% of the records submitted to AIPL include maternal grandsire (MGS) identification (ID). Integrating the CE database with the production database was expected to improve data editing. MATERIALS and METHODS Master file of dystocia data obtained by AIPL in 1999 is updated biannually with DHIA and AI cooperators’ data. CE database includes two primary tables: CE records. Pedigree information supplemental to the production database. Dystocia records are compared to the production database. In the case of ambiguous or unknown dam ID a negative key is assigned to the dam. Allows retention of data. Preserves MGS ID. Duplicate records were identified. Records with the same positive dam key and calving 6mo. Records with the same negative dam key and non-zero dam ID, in the same herd, and calving 6mo. Records with no dam ID, in the same herd, with the same calving date. Editing of CE data is improved by accessing information from existing databases. Rate of MGS ID increased via existing pedigree data. Database supports complex queries and on-line access. RESULTS and DISCUSSION CE Database Source Data Input11,063,139 Updates373,318 Duplicates132,160 Rejects79,371 Accepted10,478,290 Accepted Records Non-Holstein62,390 Born <198089,058 Multiple birth52,996 Bull >15yr old78,749 Extracted data10,195,097 Distribution of CE scores Source Data Extracted Data CE Score Percent 1 – No Problem 76.076.3 2 – Slight Problem 10.110.5 3 – Needed Assistance 9.08.8 4 – Considerable Force 2.9 5 – Extreme Difficulty 1.5 Percent Distribution of CE Scores by Parity for Extracted Data Rate of MGS ID increased from 58% to 73%. Nearly 70% of the accepted dams were matched with the production database and 99% of these records included MGS ID. Of dams with a negative key, only 13% included MGS ID. Variation in the distribution of CE Score within herd was considerable. The extraction process produce no appreciable change in the distribution of CE scores. Percentage of male calves was 51.5 in both the accepted source data and the database extract. The distribution of records across parity was similar in the accepted source data and the database extract. First calvings were significantly more difficult, but little difference was seen between later parities. CONCLUSIONS Parity 1 st 2 nd ≥3 rd Accepted data26.129.344.6 Extracted data25.629.445.2
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