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Demographic PVAs Simulating Demographic Stochasticity and Density Dependence
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Demographic stochasticity Simulated by performing so-called Monte Carlo simulations: the fate of each individual in a certain class and a certain year is decided by a set of independent random choices, all of which are based on the same set of mean vital rates However this can greatly slow a program
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Variability caused by demographic stocahsticity in binomial vital rates
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Techniques to how to perform Monte Carlo simulations For vital rates that are probabilities: Pick a uniform random number and compare its value to the probabilities of different fates an individual might experience
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How to use a uniform random number to decide between fates in a Monte Carlo simulation a 34 a 34 +a 44 1 Die a 34 +a 44 +a 54 a 34 +a 44 +a 54 +a 64 Survive and shrink to class 3 Survive and stay to class 4 Survive and grow to class 5 Survive and grow to class 6 0
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Adding demographic stochasticity to reproduction Determine if the individual lives Use a Poisson or another discrete distributions to obtain the individual fertility
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Number of flowers P (y=r) = (e –μ μ r ) / r! Population 1; 2000 Population 2; 2000 Sampling from Poisson distributions to estimate flower production Avg. # Flowers 200020012002 pop11.450.751.26 pop21.3901.63 pop33.411.894.10 pop43.223.625.00 pop55.711.734.86 pop62.690.691.65
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Number of seeds per flower Population 1; 2000 Sampling from normal distributions to estimate seed production Avg. # Seeds 200020012002 pop163 53 pop2566242 pop35443 pop4554938 pop5635441 pop6685033
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Including density dependence Two factors make it more difficult to account for density dependence in demographic PVAs 1.We will rarely have as many years of vital rate estimates from a demographic study 2.There are many more variable that are potentially density dependent
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Three questions we must consider: Which vital rates are density-dependent? How do those rates change with density? Which classes contribute to the density that each vital rate “feels”?
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Two more limited approaches to building density-dependent projection matrix models 1. Assume that there is a maximum number or density of individuals in one or more classes, or of the population as a whole, that the available resources can support, and construct a simulation model that prevents the population vector from exceeding this limit.
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Two more limited approaches to building density-dependent projection matrix models 2. Choose one or at most a few vital rates that, on the basis some evidence are suspected to be strongly density dependent
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Placing a limit on the size of one or more classes Caps or ceilings on population density are most often used to introduce density dependence when the focal species is territorial
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The Iberian Lynx
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Gaona et al. (1998) lynx population in Doñana National Park post breeding census birth-pulse population CubsJuvenilesFloatersBreeders Cubs000b x c x p x s 4 Juveniless1s1 000 Floaters0s 2 (1-g)s 3 (1-g)0 Breeders0s 2 (g)s 3 (g)s4s4 b = probability that a territory-holding female will breed in a given year c = number of cubs produced by females that do breed p = proportion of cubs that are female
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Density dependence acts on g, which represent the probability that a surviving juvenile or floater will acquire a territory next year Just before the birth pulse that precedes census t+1, there will be s 4 n 4 (t) breeding females still in possession of a territory and K- s 4 n 4 (t) vacant territories available. Gaona et al. (1998) lynx population in Doñana National Park post breeding census birth-pulse population
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g= [K-s 4 n 4 (t)]/[s 2 n 2 (t)+ s 3 n 3 (t)]
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Density dependent functions The Ricker function
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Density dependent functions Beverton-Holt model
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Density dependent functions
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IIIIIIIVV I00b 3 f 3 s 0 E(t)b 4 f 4 s 0 E(t)b 5 f 5 s 0 E(t) IIs1s1 0000 III0s2s2 000 IV00s 2 (1-b 3 )00 V000s 3 (1-b 4 )0
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