1. BCM 410A lecture 35 immunity immunoglobulin structure antibody classes monoclonal antibodies immunity immunoglobulin structure antibody classes monoclonal antibodies vaccines autoimmune diseases myeloma vaccines autoimmune diseases myeloma Structure & Function of Antibody Proteins

2. immunity immunity is the process whereby the body recognizes foreign materials, neutralizes and removes them one basis of immunity is the recognition of a foreign material, the antigen, by a glycoprotein molecule in the body, the antibody. antibodies that recognize “self” occur in the body, but they are removed and destroyed immediately after synthesis. when antibodies to “self” escape the initial screening process, they can attack the body causing autoimmune diseases.

3. some autoimmune diseases insulin-dependent juvenile onset diabetes –autoimmune attack on pancreatic  -cells which produce insulin acquired hemolytic anemia –autoimmune attack on circulating red blood cells lupus erythromatosis –autoantibodies against many blood cells, blood clotting factors and other ‘self” molecules rheumatoid arthritis –autoimmune attack on connective tissue, especially in joints myasthenia gravis –antibodies against acetylcholine receptor multiple sclerosis –antibodies against myelin basic protein, on the surfaces of nerve cells, disrupting nerve function

4. T cell and B cell activation Ag APC helper T cell MHC-antigen complex T cell receptor CD4 B cell growth and differentiation factors interleukin-2 activates Tc cells IL-1 proliferation immune response IgM

5. T cells T cells (helper T cells) are required for the proliferation of B cells and cytotoxic T cells. T cells recognize antigen through the interaction of the T cell receptor with the antigen presenting cell (APC). helper T cells secrete growth factors that stimulate B cells and cytotoxic T cells. if the population of helper T cells declines, the rest of the immune system cannot be triggered and infection results. the AIDS virus attacks helper T cells through the CD4 membrane protein.

6. The immune response Unstimulated IgM IgG

7. The immune response stimulated IgM IgG

8. The immune response IgM IgG stimulated

9. The immune response IgM IgG stimulated

10. The immune response IgM IgG stimulated

11. The immune response IgM IgG stimulated

12. the immune response the initial infection, e.g. a virus, triggers an unstim- ulated B cell to produce active B cells and memory cells while B cell is activating, virus grows eventually, enough active B cells accumulate to remove virus. for secondary response, a new infection immediately triggers the memory cells and active B cells are rapidly produced, swamping the virus immediately

13. Monoclonal antibodies One mature B cell makes only one type of antibody i.e. all the antibody molecules made by a given B cell (at one stage of development) are the same when one mature B cell is stimulated to proliferate and secrete antibody, many antibody molecules are produced, but they are all the same this is known as a monoclonal antibody because the antibodies come from a clone of B cells derived from a single original B cell.

14. epitope antigen

15. epitope epitope 1 antigen

16. epitope epitope 1 epitope 2 antigen

17. epitope An antibody recognizes only a small part of the antigen The part that is recognized is called the epitope One antigen can have many epitopes. epitope 1 epitope 2 epitope 3 antigen

18. polyclonal antibodies When an antigen is presented to T cells, or interacts with B cells, it encounters many different cells and thus different antibodies the antibodies recognize different epitopes or the same epitope in a different way. Thus, many different B cells are activated, producing different antibodies against the same antigen. This collection of antibodies is a polyclonal antibody. One unique antibody, derived from one original B cell, is a monoclonal antibody.

19. monoclonal antibody production The antigen against which an antibody is desired is purified and injected into a mouse. A small molecule may be attached to a larger one (a hapten) to increase its antigenicity. The mouse amplifies B cells that make antibodies against the antigen.

20. monoclonal antibody production B cells (including those making the antibodies) are removed and placed in cell culture in HAT medium. The B cells survive but stop growing and dividing.

21. monoclonal antibody production Myeloma cells are transformed and will normally grow in HAT medium However, these particular cells are mutants lacking the enzyme hypoxanthine-guanosine phosphoribosyl transferase (HGPRT) HGPRT - cells cannot grow in HAT medium.

22. monoclonal antibody production have HGPRT but are not transformed transformed but lack HGPRT

23. monoclonal antibody production In order to grow in HAT medium, cells must be both transformed and contain HGPRT Only fused cells will grow Fused cells will synthesize antibodies.

24. monoclonal antibody production

25. Summary: spleen cells contain B cells of interest but won’t grow; myeloma cells grow but don’t make the right antibody fusion gives cells that grow and make the antibody but fusion is rare so HAT medium is needed individual hybridomas are tested for synthesis of the required antibody monoclonal antibodies

26. HAT medium HAT medium: cell culture medium containing –hypoxanthine –aminopterin (methotrexate) –thymine Methotrexate inhibits dihydrofolate reductase and so blocks the synthesis of purines and dTMP Hypoxanthine and thymine allow cells to grow in the presence of methotrexate because: –hypoxanthine can be used to make purines in the ‘salvage” pathway involving hypoxanthine-guanosine phosphoribosyl transferase (HGPRT) –thymine can be used to make dTMP using thymidine kinase

27. antibody functional domains Fab is antigen-combining site –contains variable and hypervariable domains Fc directs antibody-mediated cell killing –complement system –phagocytosis –cell-mediated killing Fab Fc

28. antibody structure - diagrammatic antigen combining site antigen combining site

29. antibody structure antibodies are glycoproteins each antibody contains 2 heavy chains, two light chains (polypeptides) and one carbohydrate chain the primary structure shows extensive regions of highly conserved sequence and other regions which are variable or highly variable the secondary structure is mostly  -sheet the tertiary structure is a folded  -sheet structure known as the immunoglobulin fold which occurs 12 times in one immunoglobulin the quaternary structure is maintained by multiple interactions, including S-S bonds.

30. antibody classes heavylightlocationchain IgA  or body secretions IgD  or lymphocyte surfaces IgE  or cell surfaces; allergy IgG  or blood stream IgM  or lymphocyte surface; blood stream.

31. antibody structure - space filling

32. immunoglobulin fold

34. antibody binding

35. Office hours etc. For the rest of the quarter, normally noon to 12:45 and 4:30 to 5:30 every weekday except Monday noon. Room 4125, MS1A email: hrmatthews@ucdavis.edu ‘phone 752-3570

36. BCM 410A lecture 35 immunity immunoglobulin structure antibody classes monoclonal antibodies immunity immunoglobulin structure antibody classes monoclonal antibodies vaccines autoimmune diseases myeloma vaccines autoimmune diseases myeloma Structure & Function of Antibody Proteins