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Published byColin Fitzgerald Modified over 10 years ago
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What is neural stemness? Why is it important? What are the molecular signatures of neural stemness? What are the regulatory networks that control neural stemness? transcriptome epigenome proteome Neural stemness
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Bottom-up – single gene (REST) Map genome binding sites Map loci that are transcriptionally and/or epigenetically regulated Knock gene out in cells and mice & look at effect on function But – which aspects of transcriptional and epigenetic regulation are critical to this function? Looking for networks Top-down – networks Isolating defined regulatory modules Inferring regulatory modules
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Challenges Bottom-up: what does a network look like from a single genes point of view Top-down: what does a network look like from a global point of view Integrate all the omes to enable a network to include knowledge of the transcriptome, epigenome and proteome Find a way to conceptualise, model and test such networks Prove the value by manipulating a neural stem cell at will to any desired outcome
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