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PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1.

Published byAlbert Jones Modified over 9 years ago

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Presentation on theme: "PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1."— Presentation transcript:

1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 Figure S1. Protein sequence alignment among PfDGAT1-1 (isotig11157), PfDGAT1-2 (isotig11156), AtDGAT1 (At2g19450), and RcDGAT1 (XP_002514132). Black shading indicates identical amino acids. Gray shading indicates similar amino acids and no shading indicates dissimilar amino acids. Dashes indicate gaps in alignment.

2 PfDGAT2 AtDGAT2 RcDGAT2 PfDGAT2 AtDGAT2 RcDGAT2 PfDGAT2 AtDGAT2 RcDGAT2 PfDGAT2 AtDGAT2 RcDGAT2 PfDGAT2 AtDGAT2 RcDGAT2 PfDGAT2 AtDGAT2 RcDGAT2 Figure S2. Protein sequence alignment among PfDGAT2 (isotig19956), AtDGAT2 (At3g51520), and RcDGAT2 (XP_002528531).

3 PfDGAT3 AtDGAT3 AhDGAT3 PfDGAT3 AtDGAT3 AhDGAT3 PfDGAT3 AtDGAT3 AhDGAT3 PfDGAT3 AtDGAT3 VADGAT3 PfDGAT3 AtDGAT3 AhDGAT3 PfDGAT3 AtDGAT3 AhDGAT3 PfDGAT3 AtDGAT3 AhDGAT3 Figure S3. Protein sequence alignment among PfDGAT3 (isotig08903), AtDGAT3 (At1g48300), and AhDGAT3 (AAX62735).

4 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 PDAT1-1F1 PDAT1-1R1 PDAT1-2F1 PDAT1-2R1 PfPDAT1-1 PfPDAT1-2 PfPDAT1-1 PfPDAT1-2 Figure S4. C-terminal coding region of nucleotide sequence alignment between PfPDAT1-1 (isotig08780) and PfPDAT1-2 (isotig08781). Locations of qRT-PCR primer sequences for each gene are indicated with red arrows.

5 Amino Acid Substitution per 100 residues 0 28.8 510152025 AtPDCT PfPDCT RcPDCT PfPDCT AtPDCT RcPDCT PfPDCT AtPDCT RcPDCT PfPDCT AtPDCT RcPDCT PfPDCT AtPDCT RcPDCT PfPDCT AtPDCT RcPDCT PfPDCT AtPDCT RcPDCT PfPDCT AtPDCT RcPDCT A B Figure S5. A. Phylogenetic tree showing relatedness among PfPDCT (isotig25038) (shaded), AtPDCT (At3g15820) RcPDCT (XP_002517643). B. Amino acid sequence alignments among the same three sequences. PfPDCT is partial cDNA sequence.

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