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A Scaling Approach to Improve Variety Selection in Orchard Fruit Zack Brym Dept of Biology, Ecology Center Utah State University z.t.brym@gmail.com zackbrym.weecology.org @ZackBrym
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I like open science!
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Code: github.com/weecology/branch-arch Presentations: figshare.com
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I like open science! Code: github.com/weecology/branch-arch Presentations: figshare.com [Brym]
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I like open science! Code: github.com/weecology/branch-arch Presentations: figshare.com You are free to:
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I like open science! Code: github.com/weecology/branch-arch Presentations: figshare.com You are free to: Provided that:
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What is Scaling?
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Scaling is the description of universal patterns
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What is Scaling? Scaling is the description of universal patterns between: - morphological characteristics like branch diameter, length, surface area - biomass
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What is Scaling? Scaling is the description of universal patterns between: - morphological characteristics like branch diameter, length, surface area - biomass across size, age, species.
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What is Scaling? Scaling relationships consistent within and among ALL plants. (Niklas 2004, Price et al 2010)
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What is Scaling? Scaling relationships consistent within and among ALL plants. (Niklas 2004, Price et al 2010) Emergent patterns illustrate similarities in physiology among plants.
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What is Scaling? Scaling is a close relative to Allometry
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What is Scaling? Scaling is a close relative to Allometry - long history in forestry and agriculture
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What is Scaling? Scaling is a close relative to Allometry - long history in forestry and agriculture - usually, species-specific for individual or stand
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What is Scaling? Applications of Scaling in Horticulture - Tree architecture ‘Training System’
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What is Scaling? Applications of scaling in Horticulture - Resource partitioning ‘Yield Efficiency’
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What is Scaling? Applications of scaling in Horticulture - Resource partitioning ‘Yield Efficiency’ Cumulative Yield Trunk cross-sectional area
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What is Scaling? Applications of scaling in Horticulture - Resource partitioning ‘Yield Efficiency’ (Grossman & DeJong, 1998) B
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Why a Scaling Approach?
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Orchard fruit scale like natural trees! - Theoretical Prediction (Niklas and Spatz, 2004) Mass = Diameter 8/3
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Why a Scaling Approach? Orchard fruit scale like natural trees! - Theoretical Prediction (Niklas and Spatz, 2004) Mass = Diameter 8/3 … 8/3 = 2.67
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Why a Scaling Approach? Orchard fruit scale like natural trees! - Theoretical Prediction (Niklas and Spatz, 2004) Mass = Diameter 8/3 … 8/3 = 2.67 - Empirical Prediction (Brown 1997) Mass = Diameter 2.53
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Why a Scaling Approach? Orchard fruit scale like natural trees! R 2 = 0.914 8/3 ?
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Why a Scaling Approach? Orchard fruit scale like natural trees! Slope [95% CI] ; R 2 Cherry 2.46 [ 2.39, 2.53 ]; 0.909 Apple2.57 [ 2.49, 2.66 ]; 0.892 Both2.48 [ 2.43, 2.53 ]; 0.914 R 2 = 0.914 ?
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Why a Scaling Approach? Orchard fruit scale like natural trees! Slope [95% CI] ; R 2 Cherry 2.46 [ 2.39, 2.53 ]; 0.909 Apple2.57 [ 2.49, 2.66 ]; 0.892 Both2.48 [ 2.43, 2.53 ]; 0.914 R 2 = 0.914 2.53
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Why a Scaling Approach? Small differences in scaling distinguish varieties.
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Why a Scaling Approach? Small differences in scaling distinguish varieties. - Appropriate architecture for Training - Optimum Yield Efficiency
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Why a Scaling Approach? Small differences in scaling distinguish varieties. - Appropriate architecture for Training - Optimum Yield Efficiency Consistent differences can reveal important levers for developing and evaluating new varieties and orchard systems.
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What is a Scaling Approach?
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NC-140 2003 ‘Golden Delicious’ Dwarf Rootstocks Kaysville, Utah Bud.9Geneva 41 (CG.3041) Geneva 210 (CG.6210) M.26 JM.8 PiAu.5683 Trunk cross-sectional area
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What is a Scaling Approach?
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Segment – Level Diameter Length Surface Area Volume Mass Twig count Scar count
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What is a Scaling Approach? Segment – Level Diameter Length Surface Area Volume Mass Twig count Scar count “Estimated Exponents”
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What is a Scaling Approach? Segment – Level Diameter Length Surface Area Volume Mass Twig count Scar count Grouped pairwise and Regressed for Scaling Relationships
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What is a Scaling Approach? Segment – Level Diameter Length Surface Area Volume Mass Twig count Scar count “Branch Metrics” “Estimated Exponents”
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What is a Scaling Approach? Tree - Level Trunk cross-sectional area Height Spread Segment totals
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What is a Scaling Approach? Tree – Level Trunk cross sectional area Height Segment totals Spread Segment totals “Branch Metrics” “Estimated Exponents”
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What is a Scaling Approach? Step 1: Locate differences among rootstocks
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels Segment = ‘Internode’
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels Segment = ‘Internode’
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels Path = Maximum branch path length
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels Subtree = Totals from node
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels Subtree = Totals from node
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels Subtree = Totals from node
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Estimated Exponents - Scaling Levels Segment = ‘Internode’ Path = Maximum branch path length Subtree = Totals from node - Regression Parameters Exponent Intercept
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Variance in Confidence Intervals of Estimated Exponents
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Branch Metrics
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Branch Metrics - ANOVA - Post-hoc: Duncan’s Multiple Range
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Branch Metrics *** Letters denote groups with significant differences in means.
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What is a Scaling Approach? Step 1: Locate differences among rootstocks - Cumulative Yield *** Letters denote groups with significant differences in means.
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What is a Scaling Approach? Step 2: Correlate Significant Differences
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So, …
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Orchard fruit scale like natural trees!
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So, … Orchard fruit scale like natural trees! Branch metrics strongly relate to cumulative yield.
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So, … Orchard fruit scale like natural trees! Branch metrics strongly relate to cumulative yield. Maximum Branch Path Length R 2 = 0.868 Total Number of Pruning Scars R 2 = 0.862
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So, … Orchard fruit scale like natural trees! Branch metrics strongly relate to cumulative yield. Variation in estimated allometric exponents also relate strongly to cumulative yield.
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So, … Orchard fruit scale like natural trees! Branch metrics strongly relate to cumulative yield. Variation in estimated allometric exponents also relate strongly to cumulative yield. Mass ~ Diameter at Segment-level R 2 = 0.782 Mass ~ Volume at Path-level R 2 = 0.782
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So, … Orchard fruit scale like natural trees! Branch metrics strongly relate to cumulative yield. Variation in estimated allometric exponents also relate strongly to cumulative yield. Geneva ® 210 (aka, CG.6210) consistently produces higher yield than would be expected by body size.
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So, … Orchard fruit scale like natural trees! Branch metrics strongly relate to cumulative yield. Variation in estimated allometric exponents also relate strongly to cumulative yield. Geneva ® 210 (aka, CG.6210) consistently produces higher yield than would be expected by body size. Be sure to standardize by size!!!
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So, … Orchard fruit scale like natural trees! Branch metrics strongly relate to cumulative yield. Variation in estimated allometric exponents also relate strongly to cumulative yield. Geneva ® 210 (aka, CG.6210) consistently produces higher yield than would be expected by body size. Be sure to standardize by size!!! Use TCSA, Canopy Spread, Path Length
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Thank You… Research Mentors: Morgan Ernest & Brent Black Research Techs & Volunteers: Josh Anderson, Josh Shugart, Morey Burnham, Ken Locey, Matt Schroer, Xiao Xiao Grower Cooperators: Appenzell Farms, Hyde Park, Utah Bishops Orchards, Guilford, Connecticut Cherry Hill Orchards, Santaquin, Utah Kaysville Research Farm, Utah State University Paradise Valley Orchards, Paradise, Utah Zollinger Fruit Farm, River Heights, Utah
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