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Performance of Chiron Quantitative and Qualitative HBV PCR Assay and Confirmation of HBV Yield Cases Yiu-Lian Fong, Ph.D, Associate Director June 13, 2007
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2 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Agenda A qualitative and quantitative HBV DNA assay has been developed and validated in house for sensitive detection and accurate quantification of HBV DNA for confirmatory purposes. Assay Performance Confirming HBV Yield Cases Issues raised for standardized calibration of various genotypes
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3 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Assay Performance Analytical Sensitivity and LOD for WHO HBV Standard Analytical Sensitivities for DDL Genotypes A-G Linearity, LLOQ, reproducibility and precision Clinical Sensitivity Analytical and Clinical Specificities
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4 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Analytical Sensitivity and LOD for WHO HBV Standard HBV IU/mL # Positive / # Tested % Positive 2020/20100 1020/20100 520/20100 2.5018/2090 1.2513/2065 0.638/2040 0.313/2015 00/160 HBV (IU/mL) % Positive ED95 3.26 (2.21 – 6.53) IU/mL
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5 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Detection Rate Expected Dose (range), IU/mL Chiron QPCRUltrio*Ultrio dHBV* ED953.3 (2.2–6.5)8.0 (7.1–9.3)6.8 (6.0–7.7) ED500.8 (0.6–1.0)3.3 (3.0–3.8)3.0 (2.7–3.4) Analytical Sensitivity and LOD for WHO HBV Standard *Procleix Ultrio PI, IN0166EN Rev. A
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6 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Analytical Sensitivity for DDL HBV Genotypes HBV Cp/mL Genotype A Genotype B Genotype C Genotype D Genotype E Genotype F Genotype G 1000100 300100 50100 758283100 301007592645083100 109233 8174292 32733 20331790 00000000
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7 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Reproducibility, Linearity, Accuracy, and LLOQ R 2 = 0.995 - 0.999 CV = 0.4% - 1.3% LLOQ = 3.3 IU/mL
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8 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Clinical Sensitivity: Early Detection of Seroconversion Panel #6289 Days *ABBOTT PRISM HBsAg **Ultrio #Positive / #Tested Chiron QPCR Results #Positive / #TestedIU/mL 00.95 0/160/3 NR 20.20 0/170/3 NR 90.56 0/172/3 < 3.3 110.50 2/180/3 NR 160.21 12/173/3 6.2 180.22 16/173/3 14.1 312.15 18/183/3 962.9 364.94 18/183/3 6212.7 15 days *Acrometrix PI. **Combined testing results from multiple sites.
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9 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Clinical Sensitivity: Early Detection of Seroconversion Panel #11006 Days *ABBOTT PRISM HBsAg **Ultrio #Positive / #Tested Chiron QPCR Results #Positive / #TestedIU/mL 00.26 0/170/5 NR 30.16 0/180/5 NR 70.27 0/180/5 NR 100.24 0/160/5 NR 140.24 2/182/3 < 3.3 190.22 5/183/3 53.2 210.26 8/183/3 3.3 260.27 8/163/3 9.3 280.25 18/183/3 27.0 350.45 18/183/3 133.8 370.36 16/163/3 85.7 421.15 18/183/3 910.0 *Acrometrix PI. **Combined testing results from multiple sites. 23-28 days
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10 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Clinical Sensitivity: Early Detection of Seroconversion Panel #11008 Days *ABBOTT PRISM HBsAg **Ultrio #Positive / #Tested Chiron QPCR Results #Positive / #TestedIU/mL 00.32 0/100/3NR 70.17 0/90/3NR 280.18 0/100/3NR 310.28 1/100/3NR 360.25 0/102/3< 3.3 380.22 0/101/3 < 3.3 430.27 1/101/3 < 3.3 480.23 1/101/3 4.7 510.24 5/93/3 9.9 550.30 6/93/3 5.4 580.29 9/103/3 38.8 620.39 10/103/3196.2 650.61 10/103/3 344.1 691.35 10/10 2/2* 193.4* 18-33 days *Acrometrix PI. **Combined testing results from multiple sites
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11 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Analytical and Clinical Specificities In-house Assay Validation: 100 random donor samples tested in triplicates: all negative Freeze/thaw up to five cycles with 5, 20, and 5000 IU/mL WHO HBV standard Potential Interfering Substances Tested Anticoagulants: ACD, CPD, K 2 EDTA, K 3 EDTA, Na Citrate, Na Heparin Protein at > 7 g/dL Lipid/Triglyceride at > 3000 mg/dL Hemoglobin at > 500 mg/dL Bilirubin at >20 mg/dL Bacteria (>10 5 CFU/mol) commonly seen in blood related products Blood-born pathogens:HCV, HTLV, HAV, CMV, EBS, HSV, and HIV-1
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12 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Confirming HBV Yield Cases: Chiang Mai University Study (HBsAg Negative)* *Nantachit, N. et al, in press, 2007. **Later HBsAg positive. nd, not determined.
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13 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Quantitation of DDL Genotype A-G DDL Genotype* Bayer bDNA3.0 Cp/mL Chiron QPCR IU/mL NGI SuperQuant Cp/mL Bayer/Chiron Cp/IU NGI/Chiron Cp/IU A 38367 1997 9179 1078 28000 4.23.1 B 33171 28313107 214 410010.71.3 C 32811 10022843 250 3300011.511.6 D 40197 64293328 170 7700012.123.1 E 41079 5272108 141 3000019.514.2 F 49087 123324955 789 26000 9.9 5.2 G 37464 155827003 2278 38000 1.4 * Supplied as 30,000 Cp/mL.
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14 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Summary A sensitive qualitative and quantitative HBV DNA assay has been developed and validated in house LOD at 3.3 IU/mL for WHO HBV standard Detects various genotypes Detects window phase low viremia samples Confirms yield cases Conclusion: This highly sensitive and reliable assay is suitable for confirmatory purposes Remaining Issues: How to standardize? -How to calibrate various genotypes? -Which test method to use?
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15 | Presentation Title | Presenter Name | Date | Subject | Confidentiality Level (Strictly Confidential, Confidential, Internal Use Only) Acknowledgement Dennis Madriaga Baohe Shen Barney Krebs
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