1. Kevin L. Gunderson et al. Genome Res. 2004; 14: 870-877 Assembly of a random array 96 well microtiter plate- 1 fibers bundle per well 1 bundle ~50,000 glass optical fibers w/ silica bead attached 1,536 bead types exist: yields @ 30-fold redundancy per SNP

2. GoldenGate SNP Genotyping Assay J-B Fan et al. Cold Spring Harbor Symposia on Quantitative Biology, LXVIII, 69-78, January 2004

3. Genotyping data from one bundle J-B Fan et al. Cold Spring Harbor Symposia on Quantitative Biology, LXVIII, 69-78, January 2004

4. Kevin L. Gunderson et al. Genome Res. 2004; 14: 870-877 Decoding images from eight stages Stage-by-Stage Core-by-Core

6. Genotype Calling – More difficult SNP

8. Mean GenCalls Across SNPs