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Published byGervase Hodges Modified over 9 years ago
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Analysis of sapflow measurements of Larch trees within the inner alpine dry Inn- valley PhD student: Marco Leo Advanced Statistics WS 2010/11
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Overview Background Principle of sapflow measurements Collection of environmental data Statistical analysis of time series data Descriptive statistics Multiple linear regression Autocorrelation
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Principle of sapflow measurements Two sensors installed into the sapwood The top sensor is heated Temperature difference between the sensors Calculation of the sapflow density [ml cm 2 min] Relative sapflow for data interpretation ! Dependent variable
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Dependence of environmental parameters Collected environmental data: (independent variables)
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Typical sesonal course of sapflow density
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Box plots I
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Box plots II
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Scatter plots
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Multiple linear regression (model VPD 2 )
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y vs. fitted and residuals vs. time
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What is Autocorrelation ? Autocorrelation is the correlation of a signal with itself (Parr 1999). part of the data:
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Testing Autocorrelation Durbin Watson Test durbinWatsonTest(model_LA_2) lag Autocorrelation D-W Statistic p-value 1 0.5097381 0.9703643 0 Alternative hypothesis: rho != 0 H 0 : α = 0 → No Autocorrelation H 1 : α ≠ 0 → Autocorrelation
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Determine the strength of the Autocorrelation Autocorrelation Function (ACF) Partial Autocorrelation Function (PACF) Y t = α Y t-1 + ε t
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Time series model - ARIMA Elimination of the Autocorrelation Results: Summary Table with coefficients and standard errors
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Residual plots
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ACF and Partial ACF
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Multicollinearity Variance Inflation Factors (vif) tolerance = 1/vif
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Differential effect of the independent variables b j …regression coefficient S xj …standard deviation of x j S y …standard deviation of y
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Optimal VPD for sapflow
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Helpful R commands/features for using time series data: Arima model: the output differs from a lm model Residual diagnostic – plot(model_LA_2$resid,xlab="day of year",main="VPD2 model“) Create lines to get an overview of diagnostic plots – abline(h=0,col="red") – abline(0,1,col="red")
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Thank you for your attention !
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