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1 Lawrence Livermore National Laboratory Publication Policy Breakout Peter Olver Matthias Troyer Ron Boisvert Carol Woodward Neil Calkin Judy Borwein Nicolas Limare Ian Mitchell Randy LeVeque
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2 Lawrence Livermore National Laboratory Recommend that we put forth a set of best practices for what authors should do for reproducibility Set of procedures for authors, referees, and editors Put forth a rubric for rating papers that all can use Individual journals could adapt this as appropriate Could pull examples from sources where reproducibility is encouraged currently SIGMOD IPOL Ian’s conference (he has a draft set of recommendations)
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3 Lawrence Livermore National Laboratory What would best practices include? VM (full supplied by authos, reference VMs and partial VMs) Pros: Can execute anywhere Cons: Big (IPOL does not allow VMs because of this, reference and partial will make these submissions smaller), proprietary software is an issue All source codes Pros: All source present Cons: Hard to install and run in general (can specify compilers and make procedures to help with this) Code excerpts with implementations of relevant algorithms (ETH requires this, Science requires this – has retracted papers for this) Pros: Protects development investment, lower barrier to submit Cons: Hard to run for testing Documentation (in and out of code) and instructions for running code Test suites for submitted code and / or algorithms
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4 Lawrence Livermore National Laboratory How to introduce this expectation into the published literature Invite accepted papers to submit to a reproducibility review If not reproducible as submitted, ask for more information to bring them up to the standard Develop a special issue where papers undergo a reproducibility review (like an editors’ choice issue) Overlays for arXiv, other archives or journals (like a certification webpage) with links to pointers to “certified” papers Supplementary journals like SIAM Imaging Science and IPOL Certifying journals on sites like Romeo or ISI Thompson
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5 Lawrence Livermore National Laboratory Other items discussed Award: we generally all thought awards for excellent papers meeting reproducibility criteria would be good. However, we thought it a bit premature now. Let’s introduce criteria and standards of best practices then introduce awards in 3-5 years. Who would do reproducibility reviews? Will senior researchers respect the review? For SIGMOD it has been students and postdocs. Accepted papers have been asked to go through the process so generally senior researchers have been OK with process. How to bring in standards for reproducibility? Optional but bring in a certification system for those that meet it Positive encouragement from referees and editors – “This is a good paper but it would be better if…” Key is to ensure editors make referes aware of the expectation and opportunities
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6 Lawrence Livermore National Laboratory More points Refereeing this will take time. How do you handle that? A certification level could be one that has a level that certifies that the paper has the information to be reproducible but this has not been checked. Results on super computers could be problematic. Here details but not executables could be provided. SIGMOD tested used donated computer time. Remaining questions: How to deal with release restrictions form industry and labs? What about papers from numerical analysts with small problems for numerical results?
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7 Lawrence Livermore National Laboratory Title Points
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