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Published byBarbra Rose Modified over 9 years ago
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EML Analysis Tools Introduction Ecoinformatics Working Group Taiwan Forestry Research Institute (TFRI)
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Web Base Interfaces XSLT / DOM R - PHP Database ( Web ) Output Metadata (EML) QA/QC EML Analysis Tools – Statistical Tool ( Local or URL ) ( MySQL ) Raw data
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R-PHP – Open Source Program http://dssm.unipa.it/R-php/
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Statistical Tool http://eml.twecoinformatics.org/modules/http://eml.twecoinformatics.org/modules/
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Statistical Tool – The First Module
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Upload EML from Local
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Metadata Display Statistical Functions Raw Data Upload Select number type of the field Incude the field in R code ( select at least one ) ˇ EML transform into HTML by XSLT
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Natural numbers : positive and non-zero counting numbers (i.e. non-fractions), such as 1, 2, 3 Whole numbers : positive counting numbers and zero, such as 0, 1, 2, 3 Integer numbers : positive and negative counting numbers and zero, such as -3, -2, -1, 0, 1, 2, 3 Real numbers : negative and positive fractions and counting numbers and zero, such as -0.25, 3.14, 0, 1, -25 Number Type
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Upload raw data from Local No field header Upload
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Data Check (1-1) Just for numerical attribute Data check support Scientific notation (ex. 5.0e-1) Missing data set 'NA' for R program Data Check Functions : Edit records with bad values Set all the bad values to missing ( NA ) Eliminate all the records with bad values Ignore all the value range check problem (Just for value range error)
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Data Check (1-2) Error Summary * Data type error is bold red * Value range error is bold blue Missing Data Value If missing data value is defined by EML document, it will be converted to 'NA' type in statistical process
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1 Data Check (2) 1 Update Value Range Error : Select correct number type to real
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2 Data Check (3) Update Data Type Error : Update value ' 30. ' to ' 30 ' 2
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Data Check (4) Data Type Error : Value Range Error : Select 'Set all the bad values to missing ( NA )' option 3 Update 3 54 5 4 The message for No data error
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Edit R Code This line can not be modified
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Statistics Output
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Statistical Tool – The Second Module
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Upload EML from URL (1)
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Upload EML from URL (2) Right click
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Upload EML from URL (3) Paste EML URL
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EML transform into HTML by XSLT Metadata Display Raw Data Upload
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22 Upload rawdata from URL EML Document Data Table Right click Paste EML URL Click
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Data Check (1) Select 'Ignore all the value range check problem' option to update Next Page
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Data Check (2) Select 'Set all the bad values to missing ( NA )' option to update If no data error
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Statistical Functions Save checked data file
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Statistics Output 26
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EML Analysis Tools – Source Code http://imteam.twecoinformatics.org 27
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