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Research and teaching with blogs and wikis Feb 23, 2007 Drexel University Chemistry Department Philadelphia Area Educational.

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Presentation on theme: "Research and teaching with blogs and wikis Feb 23, 2007 Drexel University Chemistry Department Philadelphia Area Educational."— Presentation transcript:

1 Research and teaching with blogs and wikis Jean-Claude.Bradley@drexel.edu Feb 23, 2007 Drexel University Chemistry Department Philadelphia Area Educational Technology Conference

2 Where is Science headed? WE ARE HERE

3 The Robot Scientist

4 How will this happen? Self-organizing reduntant processes Self-organizing reduntant processes Agents can participate with zero or near- zero cost (free hosted services) Agents can participate with zero or near- zero cost (free hosted services) Fully Open Access (Read and Write) Fully Open Access (Read and Write) Publication of all aspects of the scientific process: Open Source Science / Open Notebook Science Publication of all aspects of the scientific process: Open Source Science / Open Notebook Science

5 How can machines know what is important? Ask the humans

6 UsefulChem Blog

7 What chemists think is important in 2005

8 Find-A-Drug

9 Diketopiperazine Library Evolves to: on pot Ugi reaction/cyclization First iteration: Solid Support Synthesis

10 The Molecules Blog

11 The Experiments Blog

12 Comments from peers

13 The UsefulChem Wiki

14 Telling the story of the failures

15 Experiments moved to wiki

16 Experiment History

17 Experiment Edits

18 Third Party Time-Stamp on Experiment Versions

19 Monitoring experimental progress

20 How are people finding our experiments?

21 Molecules found by InChI

22 Automation in UsefulChem

23 CMLRSS feed on Bioclipse

24 CMLRSS feed on Bloglines

25 Open science connectivity More info on open source science here http://usefulchem.wikispaces.com

26 Extending the interaction outside of science

27 usefulchem.blogspot.com The blog as an integrative tool

28 usefulchem.wikispaces.com/Exp049 The wiki as the laboratory notebook

29 usefulchem.wikispaces.com/Exp049 (2 min) Graphical Mining of Data with JSpecView

30 neurodatabase.org Raw Experimental Data

31 Selected Experiments (some failed) Orgprepdaily.wordpress.com

32 Orgprepdaily.wordpress.com Vendor Reliability

33 Generalized Protocols Openwetware.org

34 Lab Notebook for intra-group communication Openwetware.org

35 Discussing Hypotheses RRResearch.blogspot.com

36 Writing Code for the Automation Component Also – Rich Apodaca, Christoph Steinbeck, Peter Murray-Rust

37

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