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Published byKelley Simmons Modified over 9 years ago
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Facilitating Next Generation Science Collaboration: Marine Ecosystems Status Reports and Assessments June 24, 2014 IMBER – D2 Peter Fox (RPI/ Tetherless World Constellation and WHOI/AOP&E) pfox@cs.rpi.edupfox@cs.rpi.edu (@taswegian) and collaborators on the NSF INTEROP ECOOP project. http://tw.rpi.edu/web/project/ECOOPhttp://tw.rpi.edu/web/project/ECOOP
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Stace Beaulieu
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Why important? Stace Beaulieu
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Vision? “Our vision is to develop, facilitate, and maintain sustained multi-way engagement of natural and social scientists and many practitioners in multi- scale local to global networks for LMEs”. Goal: We want to perform routine assessments of LMEs involving all (or as many) stakeholders and we want robust science data presented in forms that various end-users can consume… and verify
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Environmental Assessment
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Northeast Status Report ?
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Generation Stace Beaulieu
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Tracing Stace Beaulieu
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Traceability Stace Beaulieu
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Leveraging the Global Change Information System Stace Beaulieu
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Instrument a tool - iPython Stace Beaulieu
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http://ipython.org/ Screenshot of IPython Notebook used to track both data and workflow provenance Code in Python, Matlab, R, other Stace Beaulieu
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http://ipython.org/ Screenshot of IPython Notebook used to track both data and workflow provenance Notebook can be shared, or output as script, HTML, PDF, other Stace Beaulieu
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PDF output of IPython Notebook with clickable links to data and code Stace Beaulieu
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Screenshot of csv file at GitHub Access not only to the data that are plotted, but also to provenance metadata for reproducibility Stace Beaulieu
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Outcomes Implemented PROV-O in iPython NoteBook* Extended global change information system ontology for this work to include dataset generation Improved the practice of annotation and generation of report materials
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Thanks!
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Past Experience with PROV Stace Beaulieu
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Extended Use Case Stace Beaulieu
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