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Published byShannon Barber Modified over 9 years ago
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Today House Keeping –RT-PCR result –Final report (manuscript style) C-value paradox.ppt Phylogeny, COI: snail species ID-ed fungal sequences
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RT-PCT results snail 1 2 3 6 6 7 8 9 9 LBP/BPI Physalysin PGRP eIF2 group 1 2 3 5 6 7 8 9 10 housekeeping Experimental
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PARASITES AND SNAIL BIOLOGY “identity, possibilities” phylogenetics “intentions” transcriptomics PCR rDNA/mito Bioanalyzer DNA-free, direct sequencing gel electrophoresis nanodrop spec Sequence ID (BLAST) editing Phylogenetics electrophoresis RT-PCR gel CTAB Trizol TA cloning, B/W screening M13 sequencing Primer design, walking Qiagen plasmid extraction Restriction digests DNA RNA GenBank submission + Sevilleta snails
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Radix swinhoei?
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C-value paradox.ppt
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Physid snail species identification Physella acuta Based on alignment of experimentally obtained partial COI encoding sequences with sequences from popset 164430598 For phylogenetic tree construction using parsimony
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Majority Rule
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Extended
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Majority Rule Extended
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Majority Rule Extended Majority Rule
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