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Published byAmos Newman Modified over 9 years ago
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How do you know when your data aren’t “close enough”? …and hand grenades!
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Null hypothesis – statement that illustrates that there is no relationship between two measured variables i.e. “nothing’s going to happen/change” Ex. “this coin is fair” (will create equal heads and tails) Ex. “ the genes are not linked” (will show independent assortment)
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There is a relationship between these to variables… Examples: This coin is NOT fair… (produces more heads than tails) These genes ARE linked… (are not assorting independently)
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Are differences between observed (collected) data and the predicted outcomes significant? Our threshold? 5% If >5% chance that random chance caused there to be a difference between the observed and expected = accept the null hypothesis = accept that differences between prediction and observed results aren’t significant (It’s a pretty generous tolerance!)
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(Sum of)
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CategoryOEO – E(O – E) 2 E Dom, dom12 Dom, rec9 Rec, dom8 Rec, rec.0 Total:∑
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How many possible outcomes are there in your experiment? In genetics, this might be phenotypes… Degrees of freedom (df) = # outcomes – 1…
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Say our df = 3 and our Chi-squared is 2.96
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Probability (p-value) would be 0.5<p<0.3
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The difference between observed and expected is Non-significant = accept null hypothesis (~40% chance that variation due to chance events)
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CategoryOEO – E(O – E) 2 E Purple stem, jagged leaf 1216.3125-4.312518.5971.14 Purple stem, smooth leaf 95.43753.562512.69142.334 Green stem, jagged leaf 85.43752.56256.56641.2076 Green stem, smooth leaf 01.8125-1.81253.28511.8125 Total: 29∑ = 6.4 x2x2
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df = 3 X 2 = 6.4 P = 0.5<P<0.1 Accept the null hypothesis!
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CategoryOEO – E(O – E) 2 E Purple stem, jagged leaf 4414509810.18 Purple stem, smooth leaf 1591509810.54 Green stem, jagged leaf 1431507490.327 Green stem, smooth leaf 57507490.98 Total: 800∑ = 2.027
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df = 3 X 2 = 2.027 P = 0.7<P<0.5 Accept the null hypothesis!
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