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Super Scaling PROOF to very large clusters Maarten Ballintijn, Kris Gulbrandsen, Gunther Roland / MIT Rene Brun, Fons Rademakers / CERN Philippe Canal / FNAL CHEP 2004
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September, 2004Super Scaling PROOF to Very Large Clusters2 Outline PROOF Overview Benchmark Package Benchmark results Other developments Future plans
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September, 2004Super Scaling PROOF to Very Large Clusters3 Outline PROOF Overview Benchmark Package Benchmark results Other developments Future plans
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September, 2004Super Scaling PROOF to Very Large Clusters4 PROOF – Parallel ROOT Facility Interactive analysis of very large sets of ROOT data files on a cluster of computers Employ inherent parallelism in event data The main design goals are: Transparency, scalability, adaptability On the GRID, extended from local cluster to wide area virtual cluster or cluster of clusters Collaboration between ROOT group at CERN and MIT Heavy Ion Group
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September, 2004Super Scaling PROOF to Very Large Clusters5 PROOF, continued Multi Tier architecture Optimize for Data Locality WAN Ready and GRID compatible Internet Master Slave User
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September, 2004Super Scaling PROOF to Very Large Clusters6 PROOF - Architecture Data Access Strategies Local data first, also rootd, rfio, SAN/NAS Transparency Input objects copied from client Output objects merged, returned to client Scalability and Adaptability Vary packet size (specific workload, slave performance, dynamic load) Heterogeneous Servers Migrate to multi site configurations
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September, 2004Super Scaling PROOF to Very Large Clusters7 Outline PROOF Overview Benchmark Package Dataset generation Benchmark TSelector Statistics and Event Trace Benchmark results Other developments Future plans
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September, 2004Super Scaling PROOF to Very Large Clusters8 Dataset generation Use the ROOT “Event” example class Script for creating PAR file is provided Generate data on all nodes with slaves Slaves generate data files in parallel Specify location, size and number of files % make_event_par.sh % root root[0] gROOT->Proof() root[1].X make_event_trees.C(“/tmp/data”,100000,4) root[2].L make_tdset.C root[2] TDSet *d = make_tdset.C()
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September, 2004Super Scaling PROOF to Very Large Clusters9 Benchmark TSelector Three selectors are used EventTree_NoProc.C – Empty Process() function, reads no data EventTree_Proc.C – Reads all data and fills histogram (actually only 35% read in this test) EventTree_ProcOpt.C – Reads a fraction of the data (20%) and fills histogram
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September, 2004Super Scaling PROOF to Very Large Clusters10 Statistics and Event Trace Global Histograms to monitor master Number of packets, number of events, processing time, get packet latency; per slave Can be viewed using standard feedback Trace Tree, detailed log of events during query Master only or Master and Slave Detailed List of recorded events follows Implemented using standard ROOT classes and PROOF facilities
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September, 2004Super Scaling PROOF to Very Large Clusters11 Events recorded in Trace Each event contains a timestamp and the recording slave or master Begin and End of Query Begin and End of File Packet details and processing time File Open statistics (slaves) File Read statistics (slaves) Easy to add new events
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September, 2004Super Scaling PROOF to Very Large Clusters12 Outline PROOF Overview Benchmark Package Benchmark results Other developments Future plans
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September, 2004Super Scaling PROOF to Very Large Clusters13 Benchmark Results CDF cluster at Fermilab 160 nodes, initial tests Pharm, Phobos private cluster, 24 nodes 6, 730 MHz P3 dual 6, 930 MHz P3 dual 12, 1.8 GHz P4 dual Dataset: 1 files per slave, 60000 events, 100 Mb
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September, 2004Super Scaling PROOF to Very Large Clusters14 Results on Pharm
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September, 2004Super Scaling PROOF to Very Large Clusters15 Results on Pharm, continued
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September, 2004Super Scaling PROOF to Very Large Clusters16 Local and remote File open Local local remote
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September, 2004Super Scaling PROOF to Very Large Clusters17 Slave I/O Performance
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September, 2004Super Scaling PROOF to Very Large Clusters18 Benchmark Results Phobos-RCF, central facility at BNL, 370 nodes total 75, 3.05 Ghz P4 dual, IDE 99, 2.4 Ghz P4 dual, IDE 18, 1.4 Ghz P3 dual, IDE Dataset: 1 files per slave, 60000 events, 100 Mb
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September, 2004Super Scaling PROOF to Very Large Clusters19 PHOBOS RCF LAN Layout
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September, 2004Super Scaling PROOF to Very Large Clusters20 Results on Phobos-RCF
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September, 2004Super Scaling PROOF to Very Large Clusters21 Looking at the problem
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September, 2004Super Scaling PROOF to Very Large Clusters22 Processing time distributions
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September, 2004Super Scaling PROOF to Very Large Clusters23 Processing time, detailed
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September, 2004Super Scaling PROOF to Very Large Clusters24 Request packet from Master
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September, 2004Super Scaling PROOF to Very Large Clusters25 Benchmark Conclusions The benchmark and measurement facility has proven to be a very useful tool Don’t use NFS based home directories LAN topology is important LAN speed is important More testing is required to pinpoint sporadic long latency
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September, 2004Super Scaling PROOF to Very Large Clusters26 Outline PROOF Overview Benchmark Package Benchmark results Other developments Future plans
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September, 2004Super Scaling PROOF to Very Large Clusters27 Other developments Packetizer fixes and new dev version PROOF Parallel startup TDrawFeedback TParameter utility class TCondor improvements Authentication improvements Long64_t introduction
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September, 2004Super Scaling PROOF to Very Large Clusters28 Outline PROOF Overview Benchmark Package Benchmark results Other developments Future plans
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September, 2004Super Scaling PROOF to Very Large Clusters29 Future plans Understand and Solve LAN latency problem In prototype stage TProof::Draw() Multi level master configuration Documentation HowTo Benchmarking PEAC PROOF Grid scheduler
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September, 2004Super Scaling PROOF to Very Large Clusters30 The End Questions?
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September, 2004Super Scaling PROOF to Very Large Clusters31 Parallel Script Execution root Remote PROOF Cluster proof TNetFile TFile Local PC $ root ana.C stdout/obj node1 node2 node3 node4 $ root root [0].x ana.C $ root root [0].x ana.C root [1] gROOT->Proof(“remote”) $ root root [0] tree->Process(“ana.C”) root [1] gROOT->Proof(“remote”) root [2] dset->Process(“ana.C”) ana.C proof proof = slave server proof proof = master server #proof.conf slave node1 slave node2 slave node3 slave node4 *.root TFile
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September, 2004Super Scaling PROOF to Very Large Clusters32 Simplified message flow Client Master Slave(s) SendFile Process(dset,sel,inp,num,first) GetEntries Process(dset,sel,inp,num,first) GetPacket ReturnResults(out,log)
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September, 2004Super Scaling PROOF to Very Large Clusters33 TSelector control flow TProof Slave(s) Begin() TSelector SlaveBegin() Send Input Objects Terminate() SlaveTerminate() Return Output Objects Process()...
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September, 2004Super Scaling PROOF to Very Large Clusters34 PEAC System Overview
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September, 2004Super Scaling PROOF to Very Large Clusters35 Active Files during Query
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September, 2004Super Scaling PROOF to Very Large Clusters36 Pharm Slave I/O
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September, 2004Super Scaling PROOF to Very Large Clusters37
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September, 2004Super Scaling PROOF to Very Large Clusters38 Active Files during Query
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