Download presentation
Presentation is loading. Please wait.
Published byCecily Dawson Modified over 9 years ago
1
Searching for Genes Important in Seed Development At1g19000 At1g74840 BY: Mike Douglas
2
MYB-Related Transcription Factor At1g19000 (GENE MODEL)
3
Genotyping Expected Wild Type Band: 1104 bp T-DNA Mutant Band: 1076 bp T-DNA Mutant Band 325 bp
4
Plant Layout Chart & Genotyping Results 15 : 13 : 3 Homozygous Wild-Type : Heterozygous : Homozygous Mutant
5
Where is AT1g19000 Expressed?
6
Cloning of Promoter Region in E. Coli Plasmid Vector ECO-RI Digestion 1 kb Ladder (+) Colony Colony I Colony II Colony III Colony IV (+) (-) 1617 1287 3500 Sequence using T7 and SP6 Primers Blast: T7 Sequencing vs. Actual Promoter Sequence Identities = 637/637 (100%) T7 Sequencing Blast: SP6 Sequencing vs. Actual Promoter Sequence Identities = 708/709 (99%) 1 MUTATION SP6 Sequencing
7
Mutant Phenotypes No Obvious Physical Phenotype Nomarski Imaging WILD TYPE EMBRYOS HOMOZYGOUS MUTANT EMBRYOS
8
At1g74840 (GENE MODEL) MYB-Related Transcription Factor
9
Genotyping 1 kb ladder 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 WILD TYPE (+) (-) 1 kb Ladder (-)
10
Plant Layout Chart & Genotyping Results ALL 18 Plants are WILD TYPE
11
Where is AT1g74840 Expressed? Expected RT-PCR product: 603 bp Ladder Leaf +RT Silique +RT gDNA TA Leaf +RT TA Seed +RT H20 Ladder NOTE: No Tubulin Band
12
Cloning of Promoter Region in E. Coli Plasmid Vector ECORI Digestion T7 and SP6 Sequencing Blast: T7 Sequencing vs. Actual Promoter Sequence Identities = 719/722 (99%) Plus/Plus Blast: SP6 Sequencing vs. Actual Promoter Sequence Identities = 705/706 (99%) Plus/Minus 4 MUTATIONS Colony I Colony II Colony III 1 kb Ladder 1888 3500
13
Phylogenic Relationship of At1g19000 and At1g74840 Cross to make DOUBLE MUTANT- may eliminate possible redundancy for mutant phenotype
Similar presentations
© 2025 SlidePlayer.com. Inc.
All rights reserved.