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Bioinformatics zInterdisciplinary science that involves developing and applying information technology for analyzing biological data Overview of Bioinformatics
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BLAST zThe BLAST programs (Basic Local Alignment Search Tools) are a set of sequence comparison algorithms that are used to search international sequence databases for regions of similarity between sequences
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BLAST http://www.ncbi.nlm.nih.gov/
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BLAST
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Program Description blastp Compares an amino acid query sequence against a protein sequence database. blastn Compares a nucleotide query sequence against a nucleotide sequence database. blastx Compares a nucleotide query sequence translated in all reading frames against a protein sequence database. You could use this option to find potential translation products of an unknown nucleotide sequence.
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BLAST ACATTTGCTT CTGACACAAC TGTGTTCACT AGCAACCTCA AACAGACACC ATGGTGCACC TGACTCCTGA GGAGAAGTCT GCCGTTACTG CCCTGTGGGG CAAGGTGAAC GTGGATGAAGTTGGTGGTGA GGCCCTGGGC AGGCTGCTGG TGGTCTACCC TTGGACCCAG AGGTTCTTTGAGTCCTTTGG GGATCTGTCC
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BLAST
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BLAST for Beginners Tutorial
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