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Published byShonda Phelps Modified over 9 years ago
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Lifewatch tools
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Software 2 data Species observations > 40 M records Tracking data birds : 1pos / 10min Taxonomy > 200.000 names Environmental data…. BIG data
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Spatial data platforms OBIS species observations -> geoserver GBIF species observations -> geoserver ENVocean -> geoserver Habitat data (UCL) -> geoserver MarineRegions -> geoserver Geoserver = OGC webservices (WMS,WFS,WCS) Postgress/PostGIS Tomcat servers
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Taxonomy & species information WORMS : all marine species WoRMS + AquaRES : marine + freshwater + antarctic PESI : all European species – Taxon matching => LSID – Synonym solving – Get taxon attributes / info MS SQL + PHP
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Some Rshiny interfaces @ VLIZ Bat detector data: – http://rshiny.lifewatch.be/bats/ http://rshiny.lifewatch.be/bats/ Monthly monitoring stations: – http://rshiny.lifewatch.be/monitoring/ http://rshiny.lifewatch.be/monitoring/ Realtime buoy data: – http://rshiny.lifewatch.be/monitoring/?type=buoy http://rshiny.lifewatch.be/monitoring/?type=buoy Geoserver OGC: – http://rstudio.lifewatch.be/p/4446/?type=ogc http://rstudio.lifewatch.be/p/4446/?type=ogc Underway data @ 1min interval: – http://rshiny.lifewatch.be/monitoring/?type=uw http://rshiny.lifewatch.be/monitoring/?type=uw
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Processing platforms R Rstudio Rshiny server Rstudio server
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LW Setup @ VLIZ GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server GEOserver2 WFS;WMS LB Underway data Buoy data Station data UVAbits data
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LW Setup @ VLIZ GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server GEOserver2 WFS;WMS LB MongoDB Tax Backbone webservices Underway data Buoy data Station data UVAbits data Zooplankton Fytoplankton Habitat data ENVOcean data Marine areas Weather data Tidal data
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LW Setup @ ICT core Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server LB GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC GEOserver 2 WFS;WMS MongoDB Tax Backbone webservices Underway data Buoy data Station data UVAbits data Zooplankton Fytoplankton Habitat data ENVOcean data Marine areas Weather data Tidal data GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC GEOserver 2 WFS;WMS MongoDB Tax Backbone webservices GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC GEOserver 2 WFS;WMS MongoDB Tax Backbone webservices Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server
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