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Copyright ©2012, Joanna Szyda Nonlinear regression BIOSTATISTICS
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1.Binomial distribution - example 2.Transformations of binomial data logit probit log-log 3.Logistic regression equation equation parameter estimation example INTRODUCTION Copyright ©2012, Joanna Szyda
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BINOMIAL DISTRIBUTION
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Examples ??? Copyright ©2012, Joanna Szyda
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DATA SAMPLE 1. 1.Testing the strength of joints in aircrafts 2.Various pressure forces tested Copyright ©2012, Joanna Szyda pressure Total number defect 25005010 27007017... 43006551
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DATA SAMPLE 1. Copyright ©2012, Joanna Szyda
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sick k healthy n-k case212 control1913 1.Case - a room filled with cigarette smoke every hour for 12 hr/day 2.Control – identical room without smoke 3.Individuals killed after one year of experiment - lung cancer DATA SAMPLE 2. Copyright ©2012, Joanna Szyda
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1.Data is not continuous 2.Data originate from a binomial distribution 3.Y { sick, healthy } 4.Probability of cancer health status [y] group [x] 10= case 10 00... 11= cont 11 01 DATA SAMPLE 2. Copyright ©2012, Joanna Szyda
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DATA TRANSFORMATIONS
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DATA TRANSFORMATION 0 probability 1 - function of probability + transformation Copyright ©2012, Joanna Szyda
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1.Logistic transformation p→0 logit(p)→- p→1 logit(p)→+ p=0.5 logit(p)=1 DATA TRANSFORMATION Copyright ©2012, Joanna Szyda
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1.Logistic transformation DATA TRANSFORMATION Copyright ©2012, Joanna Szyda nonlinear dependence linear dependence
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2.Probit transformation DATA TRANSFORMATION Copyright ©2012, Joanna Szyda
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3.Log-log transformation DATA TRANSFORMATION Copyright ©2012, Joanna Szyda
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1.Logit transformation – most common 2.Probit transformation – similar to logit, but more difficult to calculate 3.Log-log transformation – used when data modeling requires nonsymmetrical distribution with respect to p=0.5 DATA TRANSFORMATION Copyright ©2012, Joanna Szyda
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LOGISTIC REGRESSION EQUATION
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Copyright ©2012, Joanna Szyda
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PARAMETER ESTIMATION Iterative least squares method Fisher's method of scoring Copyright ©2012, Joanna Szyda
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EXAMPLES
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EXAMPLE – SAMPLE 1 1.Regression equation Copyright ©2012, Joanna Szyda
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2.E.g. Probability of damage by pressure = 5 000 1.Probability of damage increases with pressure EXAMPLE – SAMPLE 1 Copyright ©2012, Joanna Szyda
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1.Regression equation choroba k=0/1 n=1 grupa x=0/1 10=b. 10 00... 11=k. 11 01 3.Probability of cancer in case group: 2.Probability of cancer is lower in a control group 4.Probability of cancer in control group: EXAMPLE – SAMPLE 2 Copyright ©2012, Joanna Szyda
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EXAMPLE Copyright ©2012, Joanna Szyda
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NONLINEAR REGRESSION example datadata transformation regression equation results interpretation
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