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Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Annual Review NoE No. 507505 Semantic Interoperability and Data Mining in Biomedicine WP20.

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Presentation on theme: "Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Annual Review NoE No. 507505 Semantic Interoperability and Data Mining in Biomedicine WP20."— Presentation transcript:

1 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Annual Review NoE No. 507505 Semantic Interoperability and Data Mining in Biomedicine WP20 [SemanticMining]

2 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Outline From 2005 to 2006… Semantic Mining in Biomedicine (D15) Multilingual Medical Dictionary –Report on multi-lingual medical dictionary (D20.1) –Interchange format for multi-lingual dictionaries (D20.2) Next ?

3 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Catholic University of Paraná, Brazil –Lexeme acquisition –EHR indexing and retrieval

4 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Enhancement of Lexicon Joint development of lexicon acquisition methodologies Joint corpus acquisition IR showcase applications

5 Annual Review, Brussels March XX, 2006 SemanticMining No.507505

6 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Enhancement of Lexicon Joint development of lexicon acquisition methodologies Joint corpus acquisition IR showcase applications

7 Annual Review, Brussels March XX, 2006 SemanticMining No.507505

8 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Enhancement of Lexicon Joint development of lexicon acquisition methodologies Joint corpus acquisition IR showcase applications

9 Annual Review, Brussels March XX, 2006 SemanticMining No.507505

10 Annual Review, Brussels March XX, 2006 SemanticMining No.507505

11 Annual Review, Brussels March XX, 2006 SemanticMining No.507505

12 Annual Review, Brussels March XX, 2006 SemanticMining No.507505

13 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Catholic University of Paraná, Brazil –Lexeme acquisition –EHR indexing and retrieval

14 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Standardization of Corpus Interchange Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Catholic University of Paraná, Brazil –Lexeme acquisition –EHR indexing and retrieval

15 Annual Review, Brussels March XX, 2006 SemanticMining No.507505

16 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Standardization of Corpus Interchange Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Catholic University of Paraná, Brazil –Lexeme acquisition –EHR indexing and retrieval

17 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Multilingual Lexicon. Goals for 2005 MorphoEdit lexicon editor MorphoSaurus segmenter & indexer Exchange of French and Swedish lexemes Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Standardization of Lexicon Interchange Format Negotiations on Semantic Medical document indexing with private and public partners in Germany 1 IST call 4 proposal Catholic University of Paraná, Brazil –Lexeme acquisition –EHR indexing and retrieval WP 20 partners involved in several new EU projects (@neurist, BootSTREP…)

18 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 2005: Evaluation: Multilingual Medical Dictionary (WP20) Q1. Workshops and Symposiums –Active Participation at Summer School 2005 –Preparation of Workshop at LREC ’06 “Acquiring and representing multilingual, specialized lexicons: the case of biomedicine” –Presentations in numerous international conferences (ACM-SIGIR, MIE, AMIA, MEDNET…) Q2. Sharing of resources and use of research software tools –lexical resources, lexicon editing tools, lexicon acquisition tools, domain specific text corpora Q6. Short and medium-term visits –8 short and medium term visits Q7. Co-authoring of research papers –13 co-authored peer-reviewed papers

19 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 2006 ?

20 Annual Review, Brussels March XX, 2006 SemanticMining No.507505 Goals for 2006 Enhance showcase applications Automatically acquire acronyms expansions Complete and share domain corpora Sharing Tools and Resources International Cooperation Fund Raising Dissemination and Standards activities Use of acquired lexicons, lexical links and corpora for bootstrapping the acquired lexicon At least one contract between one WP20 partner and a private or public customer Preparation of IP project for 7th Framework programme, expanding the lexicon’s scope to all major European languages Catholic University of Paraná, Brazil –Lexicon validation –Semantic EHR indexing and retrieval in a hospital setting


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