Presentation is loading. Please wait.

Presentation is loading. Please wait.

Supporting Information Figure 1. Venn diagrams displaying the technical triplicate protein group identification for (a) SW480 control (b) SW480 5-FU (c)

Published byPriscilla Thornton Modified over 9 years ago

Similar presentations

Presentation on theme: "Supporting Information Figure 1. Venn diagrams displaying the technical triplicate protein group identification for (a) SW480 control (b) SW480 5-FU (c)"— Presentation transcript:

1 Supporting Information Figure 1. Venn diagrams displaying the technical triplicate protein group identification for (a) SW480 control (b) SW480 5-FU (c) SW260 control (d) SW620 5-FU. Total number of protein groups identified for each technical replicate (TR) is displayed. Supporting Information Figure 2. Representative LC-MS/MS peptide ion fragmentation spectra of select peptides from several proteins (a) Catenin beta-1 (P35222) (b) Pyruvate kinase (P14618) (c) Peroxiredoxin-6 (P30041) (d) Transforming protein RhoA (P61586). Supporting Information Figure 3. The coefficient of variation (CV%) for the proteins identified in each sample are plotted as a function of spectral counts (SpC); (a) SW480 control (b) SW480 5-FU (c) SW620 control (d) SW620 5-FU.

2 TR 1 TR 2 TR 3 279 275 271 228 390 391 B TR 1 TR 2 TR 3 246 258 242 179 365 370 371 A TR 1 TR 2 TR 3 389 381 396 326 521 508 522 C TR 1 TR 2 TR 3 347 351 352 289 494 485 487 D Supporting Information Figure 1

3 Supporting Information Figure 2 GDLGIEIPAEK found in KPYM b HFCPNVPIILVGNK found in RhoA d LPFPIIDDR found in PRDX6 c LLNDEDQVVVNK found in CTNNB1 a

4 a Supporting Information Figure 3

Download ppt "Supporting Information Figure 1. Venn diagrams displaying the technical triplicate protein group identification for (a) SW480 control (b) SW480 5-FU (c)"

Similar presentations

Quality Series (Sample Slides)

Quality Series (Sample Slides)
Supplemental Fig. S1 Icelogo plots of HLA-A2, HLA-B7 and HLA-B44 binding peptides of 8-14 mer length and Icelogo plots of HLA-C binding peptides of 8-11.

Supplemental Fig. S1 Icelogo plots of HLA-A2, HLA-B7 and HLA-B44 binding peptides of 8-14 mer length and Icelogo plots of HLA-C binding peptides of 8-11.
1336 SW Bertha Blvd, Portland OR 97219

1336 SW Bertha Blvd, Portland OR 97219
Generalized Protein Parsimony and Spectral Counting for Functional Enrichment Analysis Nathan Edwards Department of Biochemistry and Molecular & Cellular.

Generalized Protein Parsimony and Spectral Counting for Functional Enrichment Analysis Nathan Edwards Department of Biochemistry and Molecular & Cellular.
Y x x. y = x y y x x. y = - x y y x x. y = 0 Two vectors x and y are orthogonal when their scalar product is zero x. y = 0and xy = 1= Two vectors x and.

Y x x. y = x y y x x. y = - x y y x x. y = 0 Two vectors x and y are orthogonal when their scalar product is zero x. y = 0and xy = 1= Two vectors x and.
Building and Using Libraries of Peptide Ion Fragmentation Spectra S.E. Stein, L.E. Kilpatrick, M. Mautner, P. Neta, J. Roth National Institute of Standards.

Building and Using Libraries of Peptide Ion Fragmentation Spectra S.E. Stein, L.E. Kilpatrick, M. Mautner, P. Neta, J. Roth National Institute of Standards.
Timed. Transects Statistics indicate that overall species Richness varies only as a function of method and that there is no difference between sites.

Timed. Transects Statistics indicate that overall species Richness varies only as a function of method and that there is no difference between sites.
ProReP - Protein Results Parser v3.0©

ProReP - Protein Results Parser v3.0©
P247. Figure 9-1 p248 Figure 9-2 p251 p251 Figure 9-3 p253.

P247. Figure 9-1 p248 Figure 9-2 p251 p251 Figure 9-3 p253.
Previous Lecture: Regression and Correlation

Previous Lecture: Regression and Correlation
Each results report will contain:

Each results report will contain:
Scaffold Download free viewer:

Scaffold Download free viewer:
Gene Set Enrichment and Splicing Detection using Spectral Counting Nathan Edwards Department of Biochemistry and Mol. & Cell. Biology Georgetown University.

Gene Set Enrichment and Splicing Detection using Spectral Counting Nathan Edwards Department of Biochemistry and Mol. & Cell. Biology Georgetown University.
Evaluated Reference MS/MS Spectra Libraries Current and Future NIST Programs.

Evaluated Reference MS/MS Spectra Libraries Current and Future NIST Programs.
Organizing Numbers into Number Sets. Definitions and Symbols for Number Sets Counting numbers ( maybe 0, 1, 2, 3, 4, and so on) Natural Numbers: Positive.

Organizing Numbers into Number Sets. Definitions and Symbols for Number Sets Counting numbers ( maybe 0, 1, 2, 3, 4, and so on) Natural Numbers: Positive.
Identification of regulatory proteins from human cells using 2D-GE and LC-MS/MS Victor Paromov Christian Muenyi William L. Stone.

Identification of regulatory proteins from human cells using 2D-GE and LC-MS/MS Victor Paromov Christian Muenyi William L. Stone.
1 Quantitative Proteomic Sample Set Amounts displayed as fmols per µg of digested yeast lysate Each sample theoretically contains 15 µg of digested yeast.

1 Quantitative Proteomic Sample Set Amounts displayed as fmols per µg of digested yeast lysate Each sample theoretically contains 15 µg of digested yeast.
Proteomics Informatics – Data Analysis and Visualization (Week 13)

Proteomics Informatics – Data Analysis and Visualization (Week 13)
Applications of Fourier Transform. Outline Sampling Bandwidth Energy density Power spectral density.

Applications of Fourier Transform. Outline Sampling Bandwidth Energy density Power spectral density.
Figure S1. Experimental overview. Set 1 (S1) and Set 2 (S2) reactors were inoculated on different days with separately prepared source electrode cell extracts.

Figure S1. Experimental overview. Set 1 (S1) and Set 2 (S2) reactors were inoculated on different days with separately prepared source electrode cell extracts.

Similar presentations

Ads by Google