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Supplementary table 2. Genes upregulated in both microarray and RNA-seq analysis Gene IDGene SymbolGenBank accesion no.Microarray FCP.ValueRNA-seq FCTM/SP.

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Presentation on theme: "Supplementary table 2. Genes upregulated in both microarray and RNA-seq analysis Gene IDGene SymbolGenBank accesion no.Microarray FCP.ValueRNA-seq FCTM/SP."— Presentation transcript:

1 Supplementary table 2. Genes upregulated in both microarray and RNA-seq analysis Gene IDGene SymbolGenBank accesion no.Microarray FCP.ValueRNA-seq FCTM/SP Six Transmembrane Epithelial Antigen Of The Prostate 1STEAP1NM_0124494.190.0023.846 Carbonic Anhydrase IxCA9NM_0012164.230.009.951 Eph Receptor B2EPHB2NM_0044421.760.0022.971 Solute Carrier Family 39 (Zinc Transporter), Member 4SLC39A4NM_0177671.320.0022.37 Udp Glycosyltransferase 8UGT8NM_0033602.270.0022.942 Protocadherin 7PCDH7NM_0025892.290.0010.162 Serine Incorporator 2SERINC2NM_1788652.140.008.0711 Lysophosphatidic Acid Receptor 2LPAR2NM_0047201.020.0023.176 Matrix Metallopeptidase 14 (Membrane-Inserted)MMP14NM_0049951.550.004.681 Steap Family Member 3, MetalloreductaseSTEAP3NM_1829152.100.0023.716 Proteolipid Protein 2 (Colonic Epithelium- Enriched)PLP2NM_0026681.420.004.554 Transmembrane Protease, Serine 4TMPRSS4NM_0198944.170.0011.031 Ring Finger Protein 43RNF43NM_0177634.290.0020.982 Shisa Homolog 2 (Xenopus Laevis)SHISA2NM_0010075382.280.008.562 Desmocollin 2DSC2NM_0244221.750.0023.852 Prostaglandin F2 Receptor Negative RegulatorPTGFRNNM_0204402.660.0024.551 Endothelin Converting Enzyme 2ECE2NM_0323311.690.0021.91 Atp-Binding Cassette, Sub-Family C (Cftr/Mrp), Member 3ABCC3NM_0037863.160.003.1214 Atp-Binding Cassette, Sub-Family A (Abc1), Member 1ABCA1NM_0055021.420.0010.5611 Solute Carrier Family 39 (Metal Ion Transporter), Member 11SLC39A11NM_1391771.010.0021.557 Integrin, Alpha 11ITGA11NM_0010044391.910.004.961 Fibroblast Activation Protein, AlphaFAPNM_0044602.810.0025.051 Bmp And Activin Membrane-Bound Inhibitor Homolog (Xenopus Laevis)BAMBINM_0123421.990.0011.921 Receptor Accessory Protein 4REEP4NM_0252321.170.007.152 Slam Family Member 8SLAMF8NM_0201251.330.004.351 Desmoglein 2DSG2NM_0019432.760.0010.582 Prominin 2PROM2NM_0011659782.050.0021.966 Leucine-Rich Repeats And Immunoglobulin-Like Domains 3LRIG3NM_1533771.540.0110.081 Tenascin CTNCNM_0021601.950.011.61 Semaphorin 4BSEMA4BNM_0202102.660.018.961 Asparagine-Linked Glycosylation 3ALG3NM_0057871.040.015.917 Igf-Like Family Receptor 1IGFLR1NM_0246601.330.0121.181 Opioid Receptor, Kappa 1OPRK1NM_0009121.400.0124.27 Sodium Channel, Voltage-Gated, Type Ix, Alpha SubunitSCN9ANM_0029771.500.017.0621 Coagulation Factor Ii (Thrombin) Receptor-Like 1F2RL1NM_0052422.490.0123.948 Plexin Domain Containing 1PLXDC1 (TEM7)NM_0204052.040.014.81 Solute Carrier Family 39 (Zinc Transporter), Member 6SLC39A6NM_0123191.000.0123.56 Leukocyte Immunoglobulin-Like Receptor, Subfamily B Member 4LILRB4NM_0068471.290.0123.681 Elovl Fatty Acid Elongase 6ELOVL6NM_0240901.360.013.76 Serine Peptidase Inhibitor, Kunitz Type, 2SPINT2NM_0211022.570.015.771 Protease, Serine, 16 (Thymus)PRSS16NM_0058652.170.0123.931

2 Supplementary table 2. Continued Gene IDGene SymbolGenBank accesion no.Microarray FCP.ValueRNA-seq FCTM/SP Cklf-Like Marvel Transmembrane Domain Containing 7CMTM7NM_1384101.460.0210.194 Aspartate Beta-HydroxylaseASPHNM_0324671.900.022.721 Adam Metallopeptidase Domain 12ADAM12NM_0034741.310.0222.411 Heparin-Binding Egf-Like Growth FactorHBEGFNM_0019451.150.024.111 Solute Carrier Family 6 (Neurotransmitter Transporter, Creatine), Member 8SLC6A8NM_0056292.490.027.612 Transmembrane Protein 116TMEM116NM_1383412.230.028.776 Sphingosine-1-Phosphate Receptor 3S1PR3NM_0052262.270.0223.217 Glycosyltransferase-Like 1BGYLTL1BNM_1523121.060.0220.991 Perp, Tp53 Apoptosis EffectorPERPNM_0221212.190.032.144 Transmembrane Emp24 Protein Transport Domain Containing 3TMED3NM_0073641.240.035.321 Trophoblast GlycoproteinTPBGNM_0066701.480.0311.31 Sodium Channel, Nonvoltage-Gated 1 AlphaSCNN1ANM_0010382.890.036.351 Potassium Inwardly-Rectifying Channel, Subfamily J, Member 2KCNJ2NM_0008911.530.0321.52 Claudin 4CLDN4NM_0013054.520.0311.564 Claudin 7CLDN7NM_0013071.650.036.374 G Protein-Coupled Receptor 98GPR98NM_0321192.060.0321.117 Nadph Oxidase 4NOX4NM_0169311.600.039.395 Wingless-Type Mmtv Integration Site Family, Member 5AWNT5ANM_0033922.190.043.241 Sphingosine-1-Phosphate Phosphatase 2SGPP2NM_1523863.130.0423.199 Fxyd Domain Containing Ion Transport Regulator 3FXYD3NM_0011360074.700.042.192 Solute Carrier Family 7 (Anionic Amino Acid Transporter Light Chain, Xc- System), Member 11SLC7A11NM_0143312.720.0422.4912 Retinol Dehydrogenase 10 (All-Trans)RDH10NM_1720371.320.0425.662 Solute Carrier Family 2 (Facilitated Glucose Transporter), Member 1SLC2A1NM_0065162.000.0424.2712 Chemokine (C-X-C Motif) Receptor 7CXCR7NM_0203111.370.052.517 Uroplakin 1BUPK1BNM_0069523.130.0512.164 Fatty Acid 2-HydroxylaseFA2HNM_0243062.660.0521.874 Hyaluronan Synthase 3HAS3NM_0053292.520.0522.177 Transmembrane Protein 54TMEM54NM_0335041.610.059.934 Solute Carrier Family 7 (Amino Acid Transporter Light Chain, L System), Member 5SLC7A5NM_0034861.640.057.211 Egf-Like, Fibronectin Type Iii And Laminin G DomainsEGFLAMNM_1524031.740.0523.461 Xk, Kell Blood Group Complex Subunit-Related, X- LinkedXKRXNM_2125591.960.0523.368 Solute Carrier Family 38, Member 1SLC38A1NM_0306741.760.052.6211 Carbonic Anhydrase XiiCA12NM_0012182.930.0522.151 Wap Four-Disulfide Core Domain 2WFDC2NM_0061033.530.065.771 Cadherin 1, Type 1, E-Cadherin (Epithelial)CDH1NM_0043603.750.061.631 Claudin 1CLDN1NM_0211013.420.066.394 Solute Carrier Organic Anion Transporter Family, Member 4C1SLCO4C1NM_1809912.110.0622.7611 Cytochrome P450, Family 4, Subfamily F, Polypeptide 3CYP4F3NM_0008964.150.0623.361 Gap Junction Protein, Beta 5, 31.1KdaGJB5NM_0052682.390.0622.964 Peptidase Inhibitor 3, Skin-DerivedPI3NM_0026382.200.0724.631

3 Supplementary table 2. Continued Gene IDGene SymbolGenBank accesion no.Microarray FCP.ValueRNA-seq FCTM/SP Cd24 MoleculeCD24NM_0132301.770.071.892 Lemur Tyrosine Kinase 3LMTK3NM_0010804341.940.0722.552 Collagen, Type Xvii, Alpha 1COL17A1NM_0004941.450.0710.561 Transient Receptor Potential Cation Channel, Subfamily V, Member 4TRPV4NM_1472041.590.0721.456 Coxsackie Virus And Adenovirus ReceptorCXADRNM_0013382.420.0810.311 Golgi Membrane Protein 1GOLM1NM_0165481.260.0811.081 Chloride Channel Accessory 2CLCA2NM_0065362.520.0824.391 Atpase, Na+/K+ Transporting, Beta 1 PolypeptideATP1B1NM_0016772.250.092.351 Mal, T-Cell Differentiation Protein 2 (Gene/Pseudogene)MAL2NM_0528862.950.091.884 Tumor-Associated Calcium Signal Transducer 2TACSTD2NM_0023532.440.091.971 Desmocollin 3DSC3NM_0244232.230.09231 Sidekick Homolog 1, Cell Adhesion Molecule (Chicken)SDK1NM_1527441.170.099.251 Junctophilin 1JPH1NM_0206471.700.0923.461 Coagulation Factor Iii (Thromboplastin, Tissue Factor)F3NM_0019931.930.091.831 Chemokine (C-X-C Motif) Ligand 9CXCL9NM_0024161.370.092.691 Mucin 4, Cell Surface AssociatedMUC4NM_0184063.220.105.312 Neuromedin BNMBNM_0210771.030.1122.281 Myelin Protein Zero-Like 2MPZL2NM_0057971.450.111.552 Glucagon ReceptorGCGRNM_0001601.530.1121.247 Serpin Peptidase Inhibitor, Clade B (Ovalbumin), Member 13SERPINB13NM_0123972.230.1222.521 Solute Carrier Family 6 (Amino Acid Transporter), Member 14SLC6A14NM_0072312.370.125.0112 Cadherin, Egf Lag Seven-Pass G-Type Receptor 1 (Flamingo Homolog, Drosophila)CELSR1NM_0142461.800.143.367 Fibroblast Growth Factor Receptor 2FGFR2NM_0229701.750.158.021 Protein Tyrosine Phosphatase, Receptor-Type, Z Polypeptide 1PTPRZ1NM_0028512.180.162.941 Pdzk1 Interacting Protein 1PDZK1IP1NM_0057641.470.1623.211 Interleukin 8IL8ENST000004019311.340.164.521 Scavenger Receptor Class A, Member 3SCARA3NM_1828261.230.1821.91 PodoplaninPDPNNM_1983891.290.194.441 Atpase, Ca++ Transporting, Type 2C, Member 2ATP2C2NM_0148611.680.206.436 Major Facilitator Superfamily Domain Containing 2AMFSD2ANM_0011364931.810.2024.1811 Parathyroid Hormone 2 ReceptorPTH2RNM_0050481.030.2021.354 C-Ros Oncogene 1, Receptor Tyrosine KinaseROS1ENST000004032841.390.2211.741 Adam Metallopeptidase Domain 23ADAM23NM_0038121.170.2322.361 Cadherin 26CDH26NM_0218101.350.2322.171 Integrin, Beta 6ITGB6NM_0008881.840.2525.771 Keratinocyte Associated Protein 3KRTCAP3NM_1738531.150.2522.093 Vascular Cell Adhesion Molecule 1VCAM1NM_0010781.030.274.21 Herv-H Ltr-Associating 2HHLA2NM_0070721.400.329.382 Family With Sequence Similarity 20, Member AFAM20ANM_0175651.320.3411.251 Solute Carrier Family 26, Member 9SLC26A9NM_0529341.670.376.039 Mucin 1, Cell Surface AssociatedMUC1NM_0024561.360.447.782

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