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Published byFrank Greene Modified over 9 years ago
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Goals of FBIRN (2006-2010) Develop multi-site functional neuroimaging tools. Calibration: Assess and correct for the major sources of variation in multi-site fMRI studies Cognitive Tasks: Develop robust protocols suitable for multi-site fMRI studies Analysis: Develop methods to analyze multi-site fMRI data Tools: Develop a scalable IT application toolkit to support multi-site fMRI studies Dissemination: Make the tools, procedures, and collected datasets widely available
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The parts of Phase III Structural scans ASL New Cognitive Tasks Resting state scans Old Cognitive Task (Auditory Oddball) DTI Total scanning time: 1:45 Total time with setup and feedback: > 2 hrs
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Reports from sites so far UCI: 1 HV; 1 hr 45 min scan time for the full protocol not including training/set-up; subject complained about length UCSF: 2 HV; no ASL; scan time 2 hr 10 min on first subject UMN: 1 HV + 2 SZ; 2+ hrs without running the full protocol UNM/MIND: 2 HV; 2+ hrs for the full protocol; subjects complained about length Iowa: 2 HV; 1.25 hrs without ASL, auditory oddball, or DTI; subjects complained about length Duke: 3 HV; scan time 2+ hours not including ASL UCLA: 1 HV, scan time 1:45 like UCI; subject complained of length
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The parts of Phase III Structural scans ASL New Cognitive Tasks Resting state scans Old Cognitive Task (Auditory Oddball) DTI Total scanning time: 1:45 Time for new Cognitive Task: 50 min. Total time with setup and feedback: > 2 hrs Calibration
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The parts of Phase III Structural scans ASL New Cognitive Tasks Resting state scans Old Cognitive Task (Auditory Oddball) DTI Total scanning time: 1:45 Time for new Cognitive Task: 50 min. Time for the Auditory Oddball and DTI: ~15 min Total time with setup and feedback: > 2 hrs Cognition Statistics
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What to do? We need to trim at least 10-15 minutes of scan time. The structurals and new task alone take a full hour. Drop the old task and DTI? Do we need 50 minutes of new task?
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Structure of the discussion Present analyses on the current task data Discuss options for reducing the protocol Drop runs of the new task Drop conditions in the new task Change the resting state scan time Drop Phase II repeated task and/or DTI
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