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Collecting tracheid anatomical data: State of the art and opportunities Patrick Fonti + ~50 data contributors

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Presentation on theme: "Collecting tracheid anatomical data: State of the art and opportunities Patrick Fonti + ~50 data contributors"— Presentation transcript:

1 Collecting tracheid anatomical data: State of the art and opportunities Patrick Fonti + ~50 data contributors patrick.fonti@wsl.ch

2 Manuscript in prep 55 Authors 26 Institutes

3 The XCELL initiative … aims at creating a central depository for Xylem CELL anatomical and density data … to preserve, harmonize and allow global pattern analyses … at the service of the community

4 Motivation Structure – Function – Performance unchangeable and datable Tree performance Mechanical stability Hydraulic safety Hydraulic efficiency Response to environment

5 Cell metrics

6 Include 3 type of surveys AREA BAND ROW

7 Meta-data Tree Label Species … Height DBH Age … Site Label Lat. Long. … Device Software Resolution Magnification Unit Type survey … Custodian Name Address E-mail Environmental data? Grid e.g. CRU-data Ring Cal. Year From to …

8 Requirements Chrono- and double geo-referenced (unique) whole ring ≥ one metric adequate mass

9 (Current) data policy Inspired from the Intellectual Property Guidelines for the TRY Initiative” The custodian, i.e.; the individual that directly contribute with data to XCELL, maintains the intellectual property rights on his/her data. In case of request: – The custodian will be contacted and informed. If no objection is raised within two weeks, it will be assumed that the custodian has given permission to make these data available for the request in question. – the data manager has the permission to supply the data. – The requester send a invitation at an early stage of manuscript preparation. Co-authorship will be offered only to those who respond to the invitation with active contribution to the manuscript.

10 38 sites 13 species 415 trees 26’233 rings 18’450’226 cells Currently

11 Geographical distribution

12 Link with environment Results indicate an overall decrease of earlywood tracheid lumen and cell wall thickness to high temperature and drought regardless of species and site conditions. In particular an increase of one degree Celsius during the summer caused a 5% reduction of earlywood cell lumen and wall thickness. Fonti & Babushkina in press Dendrochronologia

13 Link with modeling Xylogenesis + Anatomy Project ClimWOOD Cuny et al. 2014. New Phytologist

14 We also are confident … … that, by assembling a large network now, creative and unforeseen research ideas and opportunities will arise … benefit the whole community

15 Future prospects Improve database – Up-date data and harmonization – Web-page (e.g., Guidelines for collection and metadata) – “Publish the concept” First global analysis with climate Expand (density profiles, vessels, collection of images) Dream about a remotely accessible Roxas 15

16 Take home message Comments, ideas, and data are very welcome For questions: patrick.fonti@wsl.ch


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